- "Bad" ending
- "Best" Ending
- 290 Counter
- AGTP
- Achievements
- Aeon Genesis
- Alien Medal
- Areas exclusive to Cave Story 3D
- Armadillo
- Armed Scout Robot
- Armor
- Arms Barrier
- Arthur
- Arthur's House
- Arthur's Key
- Assembly Hall
- Baby Polish
- Balcony
- Balfrog
- Ballos
- Balrog
- Basil
- Basu
- Bat
- Bats
- Beast Fang
- Beetle
- Behemoth
- Black Space
- Blade
- Blocks
- Blocks (Labyrinth)
- Blood Stained Sanctuary
- Bloody Holy Land
- Bomb
- Booster
- Booster v0.8
- Booster v2.0
- Boss Attack
- Bosses
- Boulder Chamber
- Boulder Room
- Broken Sprinkler
- Bubbler
- Bubbline
- Bushlands
- Bushlands Hut
- Bute
- Buyobuyo
- Buyobuyo Base
- Camp
- Cave Story
- Cave Story+
- Cave Story (DSiWare)
- Cave Story (Nintendo 3DS eShop)
- Cave Story (Nintendo eShop)
- Cave Story (WiiWare)
- Cave Story +
- Cave Story 3D
- Cave Story Plus
- Cave Story Wiki
- Cemetary
- Cemetery
- Chaba
- Chaco
- Chaco's Lipstick
- Chako
- Chako's House
- Chako's Lipstick
- Chako's Rouge
- Challenges
- Charcoal
- Chest
- Chie
- Chinfish
- Chopper
- Clay Figure Medal
- Clinic
- Clinic Key
- Clinic Ruins
- Clock Room
- Colons
- Computer
- Controller
- Core
- Core (location)
- Coridor
- Corridor
- Costumes
- Counter Bomb
- Critter
- Critters
- Crow
- Crown
- Cthulhu
- Cthulhu's Abode
- Cthulhu's Abode?
- Cthulthu
- Cthulu
- Cure-All
- Curley Brace
- Curly
- Curly's Air Tank
- Curly's Panties
- Curly's Underwear
- Curly Bot
- Curly Brace
- Curly Clone
- Curly Clones
- Curly Story
- Current
- Daisuke "Pixel" Amaya
- Daisuke Amaya
- Dark Place
- Death
- Death Spikes
- Deleet
- Delete
- Demon Crown
- Deserted House
- Doctor
- Dr. Gero
- Dragon Eggs
- Dragon Zombie
- Dragon Zombies
- Droll
- Easy Mode
- Egg Coridor
- Egg Corridor
- Egg Corridor?
- Egg Corridor Detour
- Egg Fish
- Egg Observation Room
- Egg Observation Room?
- Eggfish
- Endings
- Enemies
- Enemy
- Energy Crystals
- Energy Tank
- Energy Tanks
- Energy crystals
- Execution Chamber
- Experience
- Experience capsule
- Explosive
- Falling Tower
- Fan
- Fire Whirl
- Fire Whirrr
- Fireball
- Fireplace
- First Cave
- Flowercub
- Frenzied Toroko
- Frog
- Fuyuhiko Date
- Fuzz
- Fuzz Core
- G-CLONE
- G-Clone
- Game Over
- Game objects
- Gaudi
- Gaudi Egg
- Giant Pignon
- Grasstown
- Grasstown Hut
- Grave Keeper
- Gravekeeper
- Graveyard
- Green Devil
- Gum
- Gum Base
- Gum Key
- Gunfish
- Gunsmith
- Hajime
- Hard Mode
- Heart
- Hearts
- Heavy Press
- Helicopter
- Hell
- Hermit Gunsmith
- Hermit Gunsmith's abode
- Hideout
- Hoppy
- Human
- Humans
- ID Card
- ID card
- Igor
- Ikachan
- Inner Wall
- Iron Bond
- Iron Head
- Ironhead
- Island
- Items
- Itoh
- Jack
- Jail
- Jail No. 1
- Jail No. 2
- Jails
- Jellies
- Jelly
- Jellyfish Juice
- Jenka
- Jenka's House
- Jukebox Mode
- Kakeru
- Kanpachi
- Kazuma
- Kazuma Sakamoto
- Killer Robot
- King
- King's Table
- King's Throne
- King of the Land
- Korons
- Kulala
- Kurara
- Labrynth
- Labyrinth
- Labyrinth B
- Labyrinth H
- Labyrinth I
- Labyrinth M
- Labyrinth Shop
- Labyrinth W
- Last Cave
- Last Cave (Hidden)
- Last Cave Hidden
- Lava
- Life Capsule
- Life Pot
- Lipstick
- Little House
- Little Man
- Littles
- Locations exclusive to Cave Story 3D
- Ma Pignon
- Machine Gun
- Machine Gun Challenge
- Machinegun
- Mahin
- Main Artery
- Main Page
- Malco
- Mannan
- Map System
- Medal of the Red Ogre
- Medals
- Meeting Room
- Megane
- Mesa
- Mick
- Midorin
- Migma Mask
- Mimiga
- Mimiga Mask
- Mimiga Village
- Misery
- Missile
- Missile Expansion
- Missile Expansions
- Missile Launcher
- Missile expansion
- Missiles
- Missle Launcher
- Mister Little
- Momorin
- Momorin Sakamoto
- Monster X
- Mr. Little
- Mr. Traveler
- Muscle Docter
- Muscle Doctor
- Mushroom Badge
- NICALiS
- Nemesis
- Nemesis Challenge
- Nemisis
- Nene
- Nicalis
- Night Ghost
- Night Ghosts
- Night Spirit
- Nikumaru Counter
- Numahachi
- Nurse Hasumi
- Nymisis
- Omega
- Orangebell
- Original Soundtrack
- Outer Wall
- Passage?
- Petit
- Pignon
- Pipe
- Pixel
- Plantation
- Plantation Workers
- Polar Star
- Polish
- Pooh Black
- Porcupine Fish
- Possessed Misery
- Possessed Sue
- Power Critter
- Power Supply Room
- Prefab Building
- Press
- Prinny Cap
- Prinny Grave
- Professor Booster
- Puchi
- Puppies
- Puppy
- Puu Black
- Quote
- Rabid Toroko
- Rabil
- Ravil
- Recon Robots
- Red Crystal
- Red Demon
- Red Flowers
- Red Ogre
- Red flowers
- Refill Terminal
- Refill terminal
- Remaster
- Remastered
- Remastered Soundtrack
- Reservoir
- Resevoir
- Rest Area
- Robot
- Robots
- Rocket
- Rolling
- Rusted Key
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